RNA-Seq of Crassostrea ariakensis - SRA

SRX27092207: RNA-Seq of Crassostrea ariakensis
1 BGISEQ (BGISEQ-500) run: 23.9M spots, 6.9G bases, 3.5Gb downloads

Design: Total RNA was extracted using the TRIzol reagent (Invitrogen, CA, USA) accordingtothemanufacturers protocol. RNA purity and quantification were evaluated using the NanoDrop2000spectrophotometer (Thermo Scientific, USA). RNA integrity was assessed usingtheAgilent2100Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA). Then the libraries were constructedusingVAHTS Universal V47 RNA_seq Library Prep Kit according to the manufacturers instructions. Thetranscriptome sequencing and analysis were conducted by OE Biotech Co., Ltd. (Shanghai, China).

Submitted by: Institute of Oceanology, Chinese Academy of Sciences

Study: Crassostrea ariakensis Transcriptome or Gene expression

PRJNA1194742 • SRP551673 • All experiments • All runs

show Abstracthide Abstract

We evaluated and compared the transcriptional profiles and lncRNAs profiles of eight tissues (gill [G], smooth muscle [SmM], striated muscle [StM], marginal mantle [MM], inside mantle [IM], heart, lip and hepatopancreas [HE]) in Suminoe oyster in response to hyper-/hypo-saline stresses.

Sample:

SAMN45853382 • SRS23551065 • All experiments • All runs

Organism: Crassostrea ariakensis

Library:

Name: S_20_3

Instrument: BGISEQ-500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 23.9M spots, 6.9G bases, 3.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR31729831	23,863,890	6.9G	3.5Gb	2024-12-16

ID:: 36570034

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